Hi JayDee and
to the forum.
If you are very lucky, the controller may have survived the reverse polarity if the Battery's
BMS prevented excessive current from damaging it.
If you temporarily reconnect the old 36V battery and the motor still runs, then the controller should be OK, but you will then need to adjust the
Nominal Battery Voltage (V) setting in the controller to 48V using the USB programming lead and PI-800 programming software
(or Bluetooth dongle and smart phone App.) before the controller will work with the new 48V battery.
The actual voltage of a 48V pack is typically higher than the 52V overprotection value setting that is set by default with the 36V nominal battery voltage settings:
However, if it doesn't run on the old 36V battery
(or on the new 48V battery after being reprogrammed for the correct battery voltage) then the controller may have suffered damage from the reverse polarity.
I'm keeping my fingers crossed and hoping that the controller still works.
Alan