I'm afraid this is just the way it was designed. It works the same way for me.
Actually I cannot think of a way this could be made to work with just the magnetic pedelec sensor. If the motor was to run faster when pedalling faster, what would then happen when you change to a lower gear? You would go faster and load the motor even more.
A torque sensor would be needed to apply throttle proportonally to the pedalling force.
Another solution would be to use the pedelec and the throttle together so that the throttle works just like now, but only when pedalling.
And yet another solution would be to have a current regulator in the controller, that would reduce the power when the current gets too high. Like when going up-hill or when not pedalling enough.
Hope to see a new advanced controller with some or all of the above
An option for updating firmware via USB would also be nice.
Helge