If the external controller draws an actual 45 Amps at 48V, the 2.2kW should make your Pie powerful enough to produce wheelspin under heavy acceleration at low speed
(and hopefully a lot of drifting fun when it doesn't spin).
You will obviously need to use longer phase wires to reach your external controller, so it might be a good idea to use 10 gauge wires or even thicker if possible to reduce the voltage drop across the wires. The Phase wires are usually colour coded Green, Yellow and Blue
(the same as the Hall sensor wires) and it is very important to get them all connected correctly to avoid damaging the new controller.
There are 36 possible combinations of the Phase and Hall sensor wires, but only 3 of those 36 combinations will allow the motor to run correctly in the forward direction.
Drilling holes in the side covers should allow better cooling, but it will also allow bugs, water, dirt, small stones and grit etc. to make its way into the motor. I would be tempted to try the motor without any cooling holes first to see just how warm the motor gets during use. If it does get very warm, then you can perhaps consider drilling holes to improve the cooling.
As I live in the UK, we don't often experience high ambient temperatures, so I would be more concerned about water getting into the motor. I would suggest using some suitable rubber grommets to fill the holes and hopefully keep all the nasty things out of the motor when the weather is not hot or the motor is not being used.
Unless you enjoy major hassle
(and are prepared to risk ruining your motor completely) I would completely forget any thoughts about rewinding the motor.
With a 48V battery, and the standard windings, it should be more than fast enough to cause plenty of minor injuries.
Take a look at
this post and
this video for more details on testing the operation of the hall sensors.
Alan