NEVER Discharge Lithium cells to 0V!
If you have done so, and managed to get them charged up again, you're just lucky.
The lower discharge voltage for LiFePo4 cells are normally 2.5V, and never below 2.0V. If a cell are below 2.5V, one should normally trickle-charge the cell until it reaches 2.5V, then apply full charge.
And fyi;
Most LiFePo4 cells have an end-of-charge voltage at 3.65V max; preferably 3.60V (You'll lose 2-3% capacity by skipping those last 0.05V, but the cells will last much longer.).
So to test the capacity of your cells, charge them up to 3.60/3.65V, and discharge them down to 2.50V with a known load, then you have your capacity.
For those of us that are lucky enough to have the iCharger (I got the 1010b+), there's a separate discharge-charge cycle program there.
Also, to get the internal resistance for your cells, press and hold the stop button for 2 seconds until it beeps, and then press the left arrow button.
Edit:
I guess the specified internal resistance are measured when the cell are fully charged.
My experience says that a cell that are worn usually shows a greater difference in the IR when discharged versus charged, compared to a good and healthy cell.
I do not know the spec. IR for your cells, but I have some 3.3V/10Ah cylindric cells here that have an IR of around 6-7mOhm when fully charged (3.60V), and around 20mOhm when discharged (2.50V). These are good cells that I get in excess of 11Ah out of when keeping them inside the limits.