Tom,
The battery indicator gauges were originally intended for use with lead acid batteries, so it may not be very accurate with the lithium packs. With lithium batteries, the voltage tends to drop much less noticeably while being discharged than with lead acid batteries, and lithium packs are also protected from becoming discharged too low by the built in
BMS.
If the cells are slightly out of balance, there's a good chance that one group of cells may reach their minimum voltage before the rest of the pack, causing the
BMS to cut off the supply to protect the weakest cells.
A good long charge will usually ensure that the cells have chance to become equally balanced.
I would charge the pack for at least 10 hours before you use it again and see if there is any noticeable difference.
It should be fine to leave the battery on charge for much longer periods if necessary without causing a problem.
All permanent magnet motors will exhibit some level of magnetic resistance while being manually turned. As the Magic Pie is much larger than most hub motors, it has many more magnets, which are also located further from the axle. This is basically why the Magic Pie develops so much torque, but unfortunately it also means there is considerably more magnetic resistance that has to be overcome while you are pedalling without motor assistance.
As well as the motor resistance, you also have to remember that the bike is now carrying a lot more weight in the form of the motor, wiring, controls and battery, which will also make the bike more difficult to pedal.
Regarding the motor starting to turn on its own, the only things I can think of would be a faulty throttle control or a poor connection on the ground wire somewhere between the throttle control and the main wiring harness on the motor.
Resistance in one of the ground wire connections would have the effect of slightly increasing the throttle signal being sent to the controller. If the resistance gradually increased over time, the motor could eventually start to turn.
With the battery turned off, if you disconnect and reconnect the throttle connector
(and the 8 pin connector on the motor harness) a few times, this should help to clean the pins and sockets of the connectors, hopefully ensuring a good connection.
It only takes an increase of 0.5V on the throttle signal wire to go from no power to low power.
Alan