OneEye covered the biggest difficulties of a rear wheel kit pretty well (points 4 and 5 in his list), but the downsides of putting that much weight & torque on the front fork outweighs those difficulties pretty handily. If you've got either a decent bike shop close by or a decent grasp of bike mechanics, dealing with a rear wheel kit shouldn't be a problem.
I bought a rear wheel kit last fall, spent the winter tinkering with it (very sporadically), have had it on the road a fair bit this spring, and can confirm your impression that the feel is very close to that of a standard bike. There was a time when I did a little bike touring, where it was common for me to have 40-60lbs packed on a bike, and found there that the weight was easiest to deal with when it was on the rear wheel. Put too much weight in the front panniers and you have trouble keeping a line and keeping control in corners. I haven't ridden anything with a front hub motor, but my guess is it'd be much the same.
When people ask me what it's like riding my bike, the closest I can come to describing it is that it's like you're always riding downhill. The only time I can really tell I have an extra 30-35lbs on the back is when I hit a bump and when I'm trying to park it. Otherwise it just feels like my bike has always felt, and handles like it always has, at least when riding on the road; I don't plan on taking it offroad.
As for mounting difficulties with a rear wheel kit, the biggest problem I had was with fitting a standard width freewheel on it and dishing the wheel to center the rim in the frame. What I'm finding with some time on the road is that I don't use but two or three gears, so having a five speed cluster is totally unnecessary. I'm planning on putting a single speed freewheel on it, and using only the front chainrings to change gears. Eliminating the multi-speed sprocket should have the added benefit of also eliminating the centering issue.